Package: albopictus 0.6
Kamil Erguler
albopictus: Age-Structured Population Dynamics Model
Implements discrete time deterministic and stochastic age-structured population dynamics models described in Erguler and others (2016) <doi:10.1371/journal.pone.0149282> and Erguler and others (2017) <doi:10.1371/journal.pone.0174293>.
Authors:
albopictus_0.6.tar.gz
albopictus_0.6.zip(r-4.5)albopictus_0.6.zip(r-4.4)albopictus_0.6.zip(r-4.3)
albopictus_0.6.tgz(r-4.4-any)albopictus_0.6.tgz(r-4.3-any)
albopictus_0.6.tar.gz(r-4.5-noble)albopictus_0.6.tar.gz(r-4.4-noble)
albopictus_0.6.tgz(r-4.4-emscripten)albopictus_0.6.tgz(r-4.3-emscripten)
albopictus.pdf |albopictus.html✨
albopictus/json (API)
| # Install 'albopictus' in R: |
| install.packages('albopictus', repos = c('https://kerguler.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/kerguler/albopictusr/issues
Last updated 5 years agofrom:4f0020cc5b. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 14 2024 |
| R-4.5-win | OK | Nov 14 2024 |
| R-4.5-linux | OK | Nov 14 2024 |
| R-4.4-win | OK | Nov 14 2024 |
| R-4.4-mac | OK | Nov 14 2024 |
| R-4.3-win | OK | Nov 14 2024 |
| R-4.3-mac | OK | Nov 14 2024 |
Exports:add<-deaddevelopeddevtablegamma_dist_probiterate<-nbinom_dist_probperturb<-sizespop
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Age-Structured Population Dynamics Model | albopictus-package albopictus |
| Add batch | add<- add<-,spop,data.frame-method add<-,spop-method |
| Read dead | dead dead,spop-method |
| Read developed | developed developed,spop-method |
| Read devtable | devtable devtable,spop-method |
| Gamma probability of death or development | gamma_dist_prob |
| Iterate population | iterate<- iterate<-,spop,data.frame-method iterate<-,spop-method |
| Negative binomial probability of death or development | nbinom_dist_prob |
| Iterate population without incrementing age or development | perturb<- perturb<-,spop,data.frame-method perturb<-,spop-method |
| Read size | size size,spop-method |
| An S4 class to represent an age-structured population | spop |